Monday, February 02, 2015

Humans Have Less Retrovirus Remnants in Genome, may be Linked to Developing Tool Use

Humans have fewer remnants of viral DNA in their genes compared to other mammals, a new study has found. This decrease could be because of reduced exposure to blood-borne viruses as humans evolved to use tools rather than biting during violent conflict and the hunting of animals.

Despite natural defence systems, a retrovirus occasionally infects a mammal's egg or sperm, and the virus's genetic code gets incorporated into the animal's own genome. This viral 'fossil' then passes down from generation to generation: we all carry remnants of DNA from viruses that infected our ancestors millions of years ago. These 'endogenous retroviruses' (ERVs) appear not to cause us any harm, even though they are known to result in diseases such as cancer in other animals.

A team of researchers from the University of Oxford and Plymouth University, UK, and the Aaron Diamond AIDS Research Center, USA, wondered if there was a combination of factors unique to humans that explained why these viral fossils in our genomes remain benign. They counted the number of times that retroviruses appear to have been integrated into an animal's genome in humans, comparing humans with 39 other mammalian species, including chimpanzees, dolphins and giant pandas.

Reporting their results in the journal Retrovirology, the researchers compared the genetic signature of the two edges of the virus. These edges are identical when the virus first invades the genome, but as they acquire random mutations over time, they slowly begin to diverge. By tracking this divergence, the research team could measure how long the retrovirus had spent in an animal's genome.

Using this measure, they found that, compared to other animals, far fewer retroviruses were incorporated into the genome for humans and other apes over the last 10 million years. Even compared to animals very similar to us, humans are unusual in not having acquired any new types of retroviruses into their DNA over the last 30 million years.

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