Was Delayed Intercontinental Seas' Euxinia A Vital for Eukaryotes to Survive During the Statherian PaleoProterozoic?

Delayed euxinia in Paleoproterozoic intracontinental seas: Vital havens for the evolution of eukaryotes?

Authors:

Spinks et al

Abstract:

Increased flux of sulfate to the oceans in the aftermath of the Great Oxidation Event (GOE) ∼2.4 billion years ago (Ga) caused major changes in seawater chemistry, which eventually contributed to the cessation of iron formation deposition ∼1.8 Ga. It is generally accepted that this engendered heterogeneous stratified redox conditions, with anoxic and sulfidic (euxinic) conditions in shallow open-marine environments and anoxic ferruginous conditions in deeper environments. However, the redox evolution of intracontinental marine basins following the cessation of iron formation deposition remains poorly understood.

Here, we report contrasting paleoredox conditions in two shale units of the lower McArthur Basin, northern Australia, soon after the cessation of iron formation deposition ∼1.84 Ga. Our data shows that the ∼1.78 Ga McDermott Formation was deposited in a sulfur-limited, anoxic shallow-marine environment, whereas the younger ∼1.73 Ga Wollogorang Formation was deposited in a euxinic shallow-marine environment. This implies a delay in the development of euxinia in a shallow intracontinental basin following the onset of euxinia in the open marine realm. Since bioessential metals are sequestered by pyrite deposition under euxinic conditions, protracted low-sulfidic conditions in 1.78 Ga intracontinental shallow environments could have provided vital niches for nitrogen-fixing prokaryotes and eukaryotes. Thus the ability for localized Paleoproterozoic intracontinental basins to remain non-euxinic after the onset of euxinia in shallow open-marine shelves highlights the importance of intracontinental environments to the evolution and diversification of microbial life, perhaps throughout the wider Proterozoic.

Evidence of Simple Multicellarity in Tonian NeoProterozoic Fossils From China

Electron microscopy reveals evidence for simple multicellularity in the Proterozoic fossil Chuaria

Authors:

Tang et al

Abstract:

Multicellularity arose multiple times in the evolutionary history of eukaryotes, and simple multicellularity may have a deep history tracing back to the Paleoproterozoic. However, complex multicellular organisms with cellular and tissue differentiation did not appear in the fossil record until the Mesoproterozoic, and it is not until the Ediacaran Period (635–541 Ma) when diverse assemblages of complex multicellular eukaryotes evolved. In the intervening Tonian Period (ca. 1000–720 Ma), the fossil record of multicellular organisms is poorly documented. To address this knowledge gap, we investigated Chuaria and associated carbonaceous compression fossils from the Tonian Liulaobei Formation in North China. These fossils have been variously interpreted as unicellular or multicellular organisms. Our analysis using backscattered-electron scanning electron microscopy (BSE-SEM) revealed direct evidence for simple multicellularity in some of these fossils and suggests that Chuaria may have had a multicellular vegetative stage in its life cycle. This study demonstrates that BSE-SEM has the potential to unveil the hidden diversity of multicellular organisms in the Tonian Period, thus enriching our knowledge about the multiple origins of multicellularity in this critical geological period before Cryogenian glaciations.

Microfossils From the Eukaryotic Decline from Tonian NeoProterozoic Australia

Organic-walled microfossils of the mid-Neoproterozoic Alinya Formation, Officer Basin, Australia

Authors:

Reidman et al

Abstract:

Estimates of Precambrian eukaryotic diversity and disparity indicate broad trends of increase in the Mesoproterozoic Era, leading to a peak and then rapid decline by ca. 750 Ma. The organic-walled microfossil assemblage presented here is representative of that mid-Neoproterozoic height of eukaryotic species richness. Organic-rich shales and siltstones of the mid-Neoproterozoic upper Alinya Formation, eastern Officer Basin, Australia, preserve an abundant and diverse assemblage of organic-walled microfossils deposited in a low-latitude, shallow marine setting. Use of scanning electron microscopy (SEM) revealed an unexpected level of morphological detail not visible in transmitted light microscopy. This led to the recognition of new species as well as establishment of degradational sequences, which aid in fossil recognition. In total, 26 taxa are described here; these include 21 previously named forms, four newly described species (Caelatimurus foveolatus, Culcitulisphaera revelata, Karenagare alinyaensis, and Morgensternia officerensis), and one new combination (Vidalopalla verrucata).

Microfossils From the Eukaryote Decline From Tonian NeoProterozoic Arizona

Systematics of organic-walled microfossils from the ca. 780–740 Ma Chuar Group, Grand Canyon, Arizona

Authors:

Porter et al

Abstract:

The ca. 780–740 Ma Chuar Group, Grand Canyon, Arizona, provides an exceptional record of life during the diversification of crown-group eukaryotes, just prior to the first Cryogenian glaciation. We document in detail the assemblage of organic-walled microfossils preserved in fine-grained siliciclastics throughout the unit. In contrast with earlier studies, we primarily used SEM to document fossil morphologies, augmented by transmitted light microscopy, FIB-SEM, and TEM. This resulted in the discovery of new species and the recognition of broad-ranging, intraspecific biological and taphonomic variation in other species. Twenty-two species and five unnamed morphotypes are described, including three new species: Kaibabia gemmulella, Microlepidopalla mira, and Volleyballia dehlerae; two new combinations: Galerosphaera walcottii and Lanulatisphaera laufeldii; and 17 previously described forms. The possible colonial green alga Palaeastrum dyptocranum Butterfield in Butterfield, Knoll, and Swett, 1994 and the index fossil Cerebrosphaera globosa (Ogurtsova and Sergeev, 1989) Sergeev and Schopf, 2010 (=C. buickii Butterfield, 1994) are described for the first time from Chuar rocks. Lanulatisphaera laufeldii, a locally abundant and globally widespread species characterized by submicrometer filamentous processes that form a reticulate network, may be a useful marker for the time interval just before the appearance of vase-shaped microfossils (VSMs) ca. 740 Ma.

Organic-walled microfossil assemblages decline in diversity upsection, coincident with the appearance of VSMs and intermittent euxinia within the basin. Whether this pattern is due to preservational bias related to greater water depth or the higher TOC of upper Chuar rocks or instead reflects biotic turnover related to the spread of euxinic water masses in the basin is unknown.

Evidence of Eukaryote Fossils From the NeoArchean?

Tubular microfossils from ∼2.8 – 2.7 Ga-old lacustrine deposits of South Africa: a sign for early origin of eukaryotes?

Authors:

Kaźmierczak et al

Abstract:

Unequivocal evidence for Archean eukaryotic life has been long sought for and is a matter of lively debate. In the absence of unambiguous fossils this debate has focused on biogeochemical signatures and molecular phylogenies. Most researchers agree that fossil forms comparable with modern eukaryotic cells can be credibly identified only in Proterozoic (∼1.8-1.6 Ga) and younger rocks. Herein, we report for the first time, Neoarchean mineralized tubular microfossils from ∼2.8-2.7 Ga lacustrine deposits of South Africa. The exceptional preservation of these microfossils allows recognition of important morphological details in petrographic thin section and in HF-macerates that links them to modern siphonous (coenocytic) green or yellow-green microalgae (Chlorophyta and Xanthophyta). The microfossil identification is supported by Raman spectroscopic analyses, EPMA, SEM/BSE and SEM/EDS microprobe analytical results, NanoSIMS elemental mapping and micro-tomographic sectioning of the thalli. All results point to indigenous, bona fide eukaryotic microfossils of algal affinity. These Neoarchean microalgae-like remains and their assumingly combined in vivo and early post-mortem precipitated mineral envelopes greatly improve our knowledge of early life and its habitats and may have far-reaching consequences for the studies of the evolution of life.

Macroscopic (complex?) Eukaryotes From the Calymmian MesoProterozoic One Billion Years Before the Cambrian Explosion

Decimetre-scale multicellular eukaryotes from the 1.56-billion-year-old Gaoyuzhuang Formation in North China

Authors:

Zhu et al

Abstract:

Fossils of macroscopic eukaryotes are rarely older than the Ediacaran Period (635–541 million years (Myr)), and their interpretation remains controversial. Here, we report the discovery of macroscopic fossils from the 1,560-Myr-old Gaoyuzhuang Formation, Yanshan area, North China, that exhibit both large size and regular morphology. Preserved as carbonaceous compressions, the Gaoyuzhuang fossils have statistically regular linear to lanceolate shapes up to 30 cm long and nearly 8 cm wide, suggesting that the Gaoyuzhuang fossils record benthic multicellular eukaryotes of unprecedentedly large size. Syngenetic fragments showing closely packed ~10 μm cells arranged in a thick sheet further reinforce the interpretation. Comparisons with living thalloid organisms suggest that these organisms were photosynthetic, although their phylogenetic placement within the Eukarya remains uncertain. The new fossils provide the strongest evidence yet that multicellular eukaryotes with decimetric dimensions and a regular developmental program populated the marine biosphere at least a billion years before the Cambrian Explosion.

Monocercomonoides (eukaryote) Completely Lacks Mitochondria

Mitochondria are membrane-bound components within cells that are often described as the cells' powerhouses. They've long been considered as essential components for life in eukaryotes, the group including plants, fungi, animals, and unicellular protists, if for no other reason than that every known eukaryote had them. But researchers reporting in the Cell Press journal Current Biology on May 12, 2016 now challenge this notion. They've discovered a eukaryote that contains absolutely no trace of mitochondria at all.

"In low-oxygen environments, eukaryotes often possess a reduced form of the mitochondrion, but it was believed that some of the mitochondrial functions are so essential that these organelles are indispensable for their life," says Anna Karnkowska, a former post-doctoral fellow at Charles University in Prague who is now at the University of British Columbia in Vancouver, Canada. "We have characterized a eukaryotic microbe which indeed possesses no mitochondrion at all."

Organisms from the genus Monocercomonoides have been recognized for more than 80 years. They are related to the human pathogens Giardia and Trichomonas, all of which belong to a group known as Metamonada, which lives exclusively in low-oxygen environments.

In the new study, Karnkowska and Vladimir Hampl at Charles University in Prague and BIOCEV, along with colleagues from the Czech Republic and Canada, sequenced the Monocercomonoides genome. They were surprised to find that this organism lacks all mitochondrial proteins.

link.

paper (open access) here.

Changes in environmental stresses and eukaryotes during the Early Triassic to the early Middle Triassic

Secular changes in environmental stresses and eukaryotes during the Early Triassic to the early Middle Triassic

Authors:

Saito et al

Abstract:

The Early Triassic, following the end-Permian mass extinction, was an interval of severe low diversity. Increasing amounts of evidence demonstrate that variable environmental stresses were widespread and intense after the end-Permian mass extinction. Here we report biomarkers from lowest Triassic to lower Middle Triassic strata in South China (Qingyan and Chaohu sections), including biomarkers for environmental stress (2-methyl hopane index) and eukaryotic algae (steranes and C21n-alkylbenzene ratio). Using the 2-methyl hopane index, we detected the persistence of environmental stress during most of the Early Triassic. Using steranes and the C21n-alkylbenzene ratio, we found a gradual increase in the biomass of eukaryotic algae during the Early to early Middle Triassic. A decrease in environmental stress in the Qingyan section (Leidapo Member) during the early Middle Triassic was synchronous with the “explosion” of the Qingyan Biota, which is characterized by a high abundance and diversity of invertebrate marine animals. Because the environmental stresses revealed by the 2-methyl hopane index encompass various factors (e.g., pH and temperature), we cannot identify the exact stresses at that time; however, our results reflect the amelioration of harsh environments for life during the interval of complete biotic recovery.

Eukaryotes Acquired Mitochondria Later Than Expected

Late acquisition of mitochondria by a host with chimaeric prokaryotic ancestry

Authors:

Pittis et al

Abstract:

The origin of eukaryotes stands as a major conundrum in biology1. Current evidence indicates that the last eukaryotic common ancestor already possessed many eukaryotic hallmarks, including a complex subcellular organization1, 2, 3. In addition, the lack of evolutionary intermediates challenges the elucidation of the relative order of emergence of eukaryotic traits. Mitochondria are ubiquitous organelles derived from an alphaproteobacterial endosymbiont4. Different hypotheses disagree on whether mitochondria were acquired early or late during eukaryogenesis5. Similarly, the nature and complexity of the receiving host are debated, with models ranging from a simple prokaryotic host to an already complex proto-eukaryote1, 3, 6, 7. Most competing scenarios can be roughly grouped into either mito-early, which consider the driving force of eukaryogenesis to be mitochondrial endosymbiosis into a simple host, or mito-late, which postulate that a significant complexity predated mitochondrial endosymbiosis3. Here we provide evidence for late mitochondrial endosymbiosis. We use phylogenomics to directly test whether proto-mitochondrial proteins were acquired earlier or later than other proteins of the last eukaryotic common ancestor. We find that last eukaryotic common ancestor protein families of alphaproteobacterial ancestry and of mitochondrial localization show the shortest phylogenetic distances to their closest prokaryotic relatives, compared with proteins of different prokaryotic origin or cellular localization. Altogether, our results shed new light on a long-standing question and provide compelling support for the late acquisition of mitochondria into a host that already had a proteome of chimaeric phylogenetic origin. We argue that mitochondrial endosymbiosis was one of the ultimate steps in eukaryogenesis and that it provided the definitive selective advantage to mitochondria-bearing eukaryotes over less complex forms.

Pondering the Precambrian #2

Precambrian in General:

The magnetic field of the Earth has been surprisingly consistent over the course of Deep Time despite the changes happening internally.

Eukaryotes appear to have acquired mitochondria late in the process of their evolution away from other forms of life.

Studying modern stromatolites gives insight to Precambian life.

What meandering rivers prior to terrestrial plant life were like.

NeoProterozoic:

Was an increase in UV light caused by rapidly flipping magnetic poles the root cause of the Cambrian Explosion?

NeoArchean:

Cerium anomalies in from NeoArchean Brazil suggest the ocean was mildly oxygenated before the Great Oxygenation Event.

MesoArchean:

Evidence subduction (and plate tectonics) were active during the MesoArchean .

PaleoArchean:

Evidence from Swaziland suggests the minerals found there do NOT support subduction (and plate tectonics) as being their source as was apparently thought previously.

Doubt is being cast on PaleoArchean carbon deposits, trace evidence of microbes, being really from the PaleoArchean.

EoArchean:

There is evidence 'proto' crust may have existed 3.8 billion years ago.

The Proterozoic Record of Eukaryotes

The Proterozoic Record of Eukaryotes

Authors:

Cohen et al

Abstract:

Proterozoic strata host evidence of global “Snowball Earth” glaciations, large perturbations to the carbon cycle, proposed changes in the redox state of oceans, the diversification of microscopic eukaryotes, and the rise of metazoans. Over the past half century, the number of fossils described from Proterozoic rocks has increased exponentially. These discoveries have occurred alongside an increased understanding of the Proterozoic Earth system and the geological context of fossil occurrences, including improved age constraints. However, the evaluation of relationships between Proterozoic environmental change and fossil diversity has been hampered by several factors, particularly lithological and taphonomic biases. Here we compile and analyze the current record of eukaryotic fossils in Proterozoic strata to assess the effect of biases and better constrain diversity through time. Our results show that mean within assemblage diversity increases through the Proterozoic Eon due to an increase in high diversity assemblages, and that this trend is robust to various external factors including lithology and paleogeographic location. In addition, assemblage composition changes dramatically through time. Most notably, robust recalcitrant taxa appear in the early Neoproterozoic Era, only to disappear by the beginning of the Ediacaran Period. Within assemblage diversity is significantly lower in the Cryogenian Period than in the preceding and following intervals, but the short duration of the nonglacial interlude and unusual depositional conditions may present additional biases. In general, large scale patterns of diversity are robust while smaller scale patterns are difficult to discern through the lens of lithological, taphonomic, and geographic variability.

Did Suspension Feeding Animals in the Ediacaran Cause an Ecological Revolution in Autotrophs?

Proterozoic photosynthesis – a critical review

Author:

Butterfield

Abstract:

Chlorophyll-based photosynthesis has fuelled the biosphere since at least the early Archean, but it was the ecological takeover of oxygenic cyanobacteria in the early Palaeoproterozoic, and of photosynthetic eukaryotes in the late Neoproterozoic, that gave rise to a recognizably modern ocean–atmosphere system. The fossil record offers a unique view of photosynthesis in deep time, but is deeply compromised by differential preservation and non-diagnostic morphologies. The pervasively polyphyletic expression of modern cyanobacterial phenotypes means that few Proterozoic fossils are likely to be members of extant clades; rather than billion-year stasis, their similarity to modern counterparts is better interpreted as a combination of serial convergence and extinction, facilitated by high levels of horizontal gene transfer. There are few grounds for identifying cyanobacterial akinetes or crown-group Nostocales in the Proterozoic record. Such recognition undermines the results of various ancestral state reconstruction analyses, as well as molecular clock estimates calibrated against demonstrably problematic Proterozoic fossils. Eukaryotic organisms are likely to have acquired their (stem-group nostocalean) photoendosymbionts/plastids by at least the Palaeoproterozoic, but remained ecologically marginalized by incumbent cyanobacteria until the late Neoproterozoic appearance of suspension-feeding animals.

Morphological Evidence Mitochondria are Endosymbiotic α-proteobacterium

Ancient Homology of the Mitochondrial Contact Site and Cristae Organizing System Points to an Endosymbiotic Origin of Mitochondrial Cristae

Authors:

Muñoz-Gómez et al

Abstract:

Mitochondria are eukaryotic organelles that originated from an endosymbiotic α-proteobacterium. As an adaptation to maximize ATP production through oxidative phosphorylation, mitochondria contain inner membrane invaginations called cristae. Recent work has characterized a multi-protein complex in yeast and animal mitochondria called MICOS (mitochondrial contact site and cristae organizing system), responsible for the determination and maintenance of cristae [ 1–4 ]. However, the origin and evolution of these characteristic mitochondrial features remain obscure. We therefore conducted a comprehensive search for MICOS components across the major groups that encompass eukaryotic diversity to determine the extent of conservation of this complex. We detected homologs for the majority of MICOS components among opisthokonts (the group containing animals and fungi), but only Mic60 and Mic10 were consistently identified outside this group. The conservation of Mic60 and Mic10 in eukaryotes is consistent with their central role in MICOS function [ 5–7 ], indicating that the basic mechanism for cristae determination arose early in evolution and has remained relatively unchanged. We found that eukaryotes with ultrastructurally simplified anaerobic mitochondria that lack cristae have also lost MICOS. We then searched for a prokaryotic MICOS and identified a homolog of Mic60 present only in α-proteobacteria, providing evidence for the endosymbiotic origin of mitochondrial cristae. Our study clarifies the origins of mitochondrial cristae and their subsequent evolutionary history, provides evidence for a general mechanism of cristae formation and maintenance in eukaryotes, and points to a new potential factor involved in membrane differentiation in prokaryotes.

Carbonaceous Compression Fossils of Macroscopic Benthic Phototrophs Found From Marinoan Cryogenian NeoProterozoic South China

The survival of benthic macroscopic phototrophs on a Neoproterozoic snowball Earth

Authors:

Ye et al

Abstract:

The greatest ice ages in Earth's history occurred during the 654–635 Ma Marinoan glaciation, when glaciers reached tropical oceans and our planet approached a snowball Earth condition. Paleontological and genomic data suggest that several eukaryotic groups must have survived the Marinoan glaciation. But their fossil record is scarce and limited to microbes, whose ecological and physiological ranges are poorly constrained, thus hampering a full understanding of how and where eukaryotic life—particularly macroscopic phototrophs—survived this snowball Earth. Here we report carbonaceous compression fossils from the Marinoan-age Nantuo Formation in South China. These fossils are preserved in thin black shales sandwiched between glacial diamictites deposited in inner shelf environments of the mid-latitudinal Yangtze block. Some of these fossils are interpreted as benthic macroalgae. Thus, the Marinoan glaciation must have been punctuated by episodes of open waters where habitable benthic substrates were available in the photic zone and along the coast of mid-latitudinal continents. Such open waters may have been the refugia where macroscopic phototrophs survived the Marinoan glaciation and subsequently diversified in the early Ediacaran Period.

Digging Into Statherian PaleoProterozoic/ Calymmian MesoProterozoic Eukaryotic Fossil Valeria

A biomechanical analysis of the early eukaryotic fossil Valeria and new occurrence of organic-walled microfossils from the Paleo-Mesoproterozoic Ruyang Group

Authors:

Pang et al

Abstract:

The Paleo-Mesoproterozoic Ruyang Group of North China hosts early eukaryotic fossils such as Dictyosphaera, Shuiyousphaeridium, and Valeria, and thus offers valuable insights into the early evolution of single-celled eukaryotic life. In this paper, we report several additional forms of organic-walled microfossils from the Ruyang Group, including Plicatidium latum, Spiromorpha sp., and an unnamed form. V. lophostriata from the Ruyang Group is investigated using transmitted light microscopy, scanning electron microscopy, transmission electron microscopy, and biomechanical analysis. V. lophostriata is reconstructed as a spherical vesicle with two hemispherical halves bearing concentric striations resembling latitudinal circles. The formation of striations could be explained using the Belousov-Zhabotinsky reaction model or the Turing reaction-diffusion model. A biomechanical analysis using the thin-walled spherical pressure vessel model suggests that the concentric striations of V. lophostriata may have functioned as a mechanism to guide biologically programmed excystment through medial split. Our analysis provides essential paleontological data to better understand the functional biology and life cycles of early eukaryotes such as Valeria.

Archaea Relative to Modern Eukaryotes Found

In a new study, published in Nature this week, a research team led from Uppsala University in Sweden presents the discovery of a new microbe that represents a missing link in the evolution of complex life. The study provides a new understanding of how, billions of years ago, the complex cell types that comprise plants, fungi, but also animals and humans, evolved from simple microbes.

Cells are the basic building blocks of all life on our planet. Yet, whereas the cells of bacteria and other microbes are small and simple, all visible life, including us humans, is generally made up of large and complex cell types. The origin of these complex cell types has long been a mystery to the scientific community, but now researchers from Uppsala University in Sweden have discovered a new group of microorganisms that represents a missing link in the evolutionary transition from simple to complex cells.

In the 1970s, the acclaimed biologist Carl Woese discovered a completely new group of microorganisms, the Archaea, and showed that these represented a separate branch in the Tree of Life -- a finding that stunned the scientific community at the time. Despite that archaeal cells were simple and small like bacteria, researchers found that Archaea were more closely related to organisms with complex cell types, a group collectively known as 'eukaryotes'. This observation has puzzled scientists for decades: How could the complex cell types from eukaryotes have emerged from the simple cells of Archaea?

In this weeks' edition of Nature, researchers from Uppsala University in Sweden, along with collaborators from the universities in Bergen (Norway) and Vienna (Austria) report the discovery of a new group of Archaea, the Lokiarchaeota (or 'Loki' for short), and identify it to be a missing link in the origin of eukaryotes.

"The puzzle of the origin of the eukaryotic cell is extremely complicated, as many pieces are still missing. We hoped that Loki would reveal a few more pieces of the puzzle, but when we obtained the first results, we couldn't believe our eyes. The data simply looked spectacular", says Thijs Ettema at the Department of Cell and Molecular Biology, Uppsala University, who lead the scientific team that carried out the study.

"By studying its genome, we found that Loki represents an intermediate form in-between the simple cells of microbes, and the complex cell types of eukaryotes", says Thijs Ettema.

When Loki was placed in the Tree of Life, this idea was confirmed.

link.

Using Ancient Dynamin Segments to Understand Mitochondrial Endosymbiosis During the Statherian PaleoProtoerozoic

Ancient dynamin segments capture early stages of host–mitochondrial integration

Authors:

Purkanti et al

Abstract:

Eukaryotic cells use dynamins—mechano-chemical GTPases—to drive the division of endosymbiotic organelles. Here we probe early steps of mitochondrial and chloroplast endosymbiosis by tracing the evolution of dynamins. We develop a parsimony-based phylogenetic method for protein sequence reconstruction, with deep time resolution. Using this, we demonstrate that dynamins diversify through the punctuated transformation of sequence segments on the scale of secondary-structural elements. We find examples of segments that have remained essentially unchanged from the 1.8-billion-y-old last eukaryotic common ancestor to the present day. Stitching these together, we reconstruct three ancestral dynamins: The first is nearly identical to the ubiquitous mitochondrial division dynamins of extant eukaryotes, the second is partially preserved in the myxovirus-resistance-like dynamins of metazoans, and the third gives rise to the cytokinetic dynamins of amoebozoans and plants and to chloroplast division dynamins. The reconstructed sequences, combined with evolutionary models and published functional data, suggest that the ancestral mitochondrial division dynamin also mediated vesicle scission. This bifunctional protein duplicated into specialized mitochondrial and vesicle variants at least three independent times—in alveolates, green algae, and the ancestor of fungi and metazoans—accompanied by the loss of the ancient prokaryotic mitochondrial division protein FtsZ. Remarkably, many extant species that retain FtsZ also retain the predicted ancestral bifunctional dynamin. The mitochondrial division apparatus of such organisms, including amoebozoans, red algae, and stramenopiles, seems preserved in a near-primordial form.

Eukaryotic Fossil During the Sturtian Glaciations of Cryogenian NeoProterozoic Australia & Svalbard

Organic-walled microfossil assemblages from glacial and interglacial Neoproterozoic units of Australia and Svalbard

Authors:

Riedman et al

Abstract:

Before the onset of the Neoproterozoic Snowball Earth glaciations, eukaryotes had begun diversifying, and in their aftermath, macroscopic life, including both animals and macroalgae, became abundant and widespread. Although glacially driven mass extinctions have been hypothesized, little is known about the biosphere during and between these glaciations. Here we present new data from organic-walled microfossil assemblages from five successions in Australia and Svalbard that collectively span the first (Sturtian) glaciation and interglacial interval and integrate them with data derived from a critical evaluation of the literature to produce a new estimate of eukaryotic diversity from 850 to 650 Ma. These new glacial and interglacial assemblages consist of only smooth-walled spheroids (leiosphaerids), aggregates of cells, and filaments, in contrast to the much more diverse organic-walled microfossil assemblages found in early Neoproterozoic rocks. This contrast is not attributed to biases in deposition or preservation, but is instead interpreted as reflecting an interval of lowered eukaryotic diversity that spanned the glaciations and that may have begun millions of years prior to their onset.

Was the Mitochondrial Ancestor a Parasite?

Phylogenomic Reconstruction Indicates Mitochondrial Ancestor Was an Energy Parasite

Authors:

Wang et al

Abstract:

Reconstruction of mitochondrial ancestor has great impact on our understanding of the origin of mitochondria. Previous studies have largely focused on reconstructing the last common ancestor of all contemporary mitochondria (proto-mitochondria), but not on the more informative pre-mitochondria (the last common ancestor of mitochondria and their alphaproteobacterial sister clade). Using a phylogenomic approach and leveraging on the increased taxonomic sampling of alphaproteobacterial and eukaryotic genomes, we reconstructed the metabolisms of both proto-mitochondria and pre-mitochondria. Our reconstruction depicts a more streamlined proto-mitochondrion than these predicted by previous studies, and revealed several novel insights into the mitochondria-derived eukaryotic metabolisms including the lipid metabolism. Most strikingly, pre-mitochondrion was predicted to possess a plastid/parasite type of ATP/ADP translocase that imports ATP from the host, which posits pre-mitochondrion as an energy parasite that directly contrasts with the current role of mitochondria as the cell’s energy producer. In addition, pre-mitochondrion was predicted to encode a large number of flagellar genes and several cytochrome oxidases functioning under low oxygen level, strongly supporting the previous finding that the mitochondrial ancestor was likely motile and capable of oxidative phosphorylation under microoxic condition.

Last Universal Common Ancestor of all Life on Earth had a Leaky Membrane, Lived in Deep Sea Vents

All life on Earth came from one common ancestor – a single-celled organism – but what it looked like, how it lived and how it evolved into today's modern cells is a four billion year old mystery being solved by researchers at UCL using mathematical modelling.

Findings published today in PLOS Biology suggest for the first time that life's Last Universal Common Ancestor (LUCA) had a 'leaky' membrane, which helps scientists answer two of biology's biggest questions:

1. Why all cells use the same bizarre, complex mechanism to harvest energy

2. Why two types of single-celled organism that form the deepest branch on the tree of life – bacteria and archaea – have completely different cell membranes

The leakiness of the membrane allowed LUCA to be powered by energy in its surroundings, most likely vents deep on the ocean floor, whilst holding in all the other components necessary for life.

The team modelled how the membrane changed, enabling LUCA's descendants to move to new, more challenging environments and evolve into two distinct types of single-celled organism, bacteria and archaea, creating the deepest branch of the tree of life.

Bacteria and archaea share many common features such as genes, proteins and mechanisms of reading DNA, initially leading scientists to believe they were just different types of bacteria. Their classification changed in the 1970's after extreme differences were found in the way they replicate DNA and in the structure of their cell membrane. As they both stemmed from LUCA, scientists set out to find answers in the structure and function of LUCA's membrane.

Dr Nick Lane (UCL Biosciences) who led the study said, "I find this work just beautiful – it constrains a sequence of steps going from the strange cell that seems to have been the ancestor of all life today, right through to the deep division between modern cells. From a single basic idea, the model can explain the fundamental differences between bacteria and archaea. Is it right? I'd like to think so, but more importantly, it makes some clear predictions that we plan to test in the future."

Data from the study strongly suggest that LUCA lived in the area where ancient seawater, dense with positively charged particles called protons, mixed with warm alkaline vent fluid, which contained few protons. The difference in the concentration of protons across these two environments enabled protons to flow into the cell, driving the production of a molecule called adenosine triphosphate (ATP) which powered the growth of cells, just as it does today. However, unlike modern cells the scientists believe this could only happen if the membrane was 'leaky', enabling protons to leave the cell spontaneously so more protons could enter to power growth.

Dr Lane said: "In these deep sea vents, there is a continuous flow of alkaline fluids, which mix with the ocean waters. When they mix, the fluids neutralise each other, and that stops any build-up of charge which would otherwise prevent protons flowing into the cell. If the first cells had leaky membranes, then protons could enter and then be neutralised, or leave again, almost as if there was no barrier at all. What we've shown is that the rate at which protons enter and leave is high enough to power the growth of cells via proteins embedded in the membrane. So LUCA could have been powered by natural proton gradients in vents, but only if it had a really leaky membrane, completely unlike today's cells."

To escape from these seabed vents, LUCA had to adapt its membrane to pump protons out of the cell, in order for them to flow back in again to help drive ATP production. The study suggests that the bacteria and archaea developed completely different cell membrane structures and proton pumps, whilst keeping the same machinery for powering growth. It also explains why they differ in fundamental traits that depend on the membrane such as DNA replication.

link.